Training materials
Contributors: @posit-pbc or Bazante Sanders or Dr. Simon Li or Martin Čech or Mehmet Tekman or Mikko Rautiainen or Prof. Michael J E Sternberg or Wolfgang Maier
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
wesm/pydata-book
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wch/rgcookbook
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jennybc/purrr-tutorial
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jennybc/happy-git-with-r
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hadley/r-pkgs
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hadley/ggplot2-book
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hadley/mastering-shiny