Training materials
Content provider: Bioinformatics and Biomathematics Training Hub or CINECA PROJECT or ELIXIR
and Keywords: Cloud computing or Data integration or Institute of Food Research or Query expansion or RStudio
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Series of videos
Query Expansion services - tutorial
•• intermediateData management Data Query data Query expansion -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Video
Solutions for overcoming cohort data integration challenges using ontology: an introduction
• beginnerOntology and terminology Data integration and warehousing Data management Ontologies Data integration Annotation -
LXDE RStudio with support for bioconductor tools
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IFR Dockerised version of the EBI's Introduction to RNA-seq course
• beginnerRNA-Seq IFR Institute of Food Research Quadram Institute -
Docker version of Welsh Gene Park NGS course
• beginnerNGS IFR Institute of Food Research Quadram Institute -
IFR Dockerised version of the Welsh Genepark's Introduction to Command-line NGS Analysis
• beginnerNGS Command line IFR Institute of Food Research Quadram Institute