Training materials
Authors: Wendi Bacon
and Contributors: Alex Ostrovsky or Christopher Barnett or Dr. Scooter Morris or Helena Rasche or Janick Mathys or Teaching materials at the Harvard Chan Bioinfor... or posit-conf-2023
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hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy
• beginnerTranscriptomics 10x Single Cell paper-replication -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell