Training materials
Authors: Helena Rasche
and Scientific topics: ChIP-seq or Genetic variation or Mass spectrometry or Molecular biology or Software engineering or Transcriptomics or Virology
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Data Manipulation Olympics - SQL
• beginnerSoftware engineering Foundations of Data Science cyoa jupyter-notebook sql -
hands-on tutorial
Data Manipulation Olympics - JQ
• beginnerSoftware engineering Foundations of Data Science cyoa json -
hands-on tutorial
Virtual Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Conda Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science conda jupyter-notebook -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Multiprocessing
••• advancedSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
• beginnerGenetic variation Variant Analysis cyoa -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy