Training materials
Authors: Helena Rasche
and Contributors: Bang Wong or Canadian Bioinformatics Workshops or Elin Kronander or John Chilton or Marius van den Beek or Mark Beaumont or Mateo Boudet
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hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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hands-on tutorial
Performant Uploads with TUS
• beginnerGalaxy Server administration -
hands-on tutorial
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Rule Based Uploader: Advanced
••• advancedUsing Galaxy and Managing your Data collections tags -
hands-on tutorial
Rule Based Uploader
•• intermediateUsing Galaxy and Managing your Data collections tags -
hands-on tutorial
Using Workflow Parameters
•• intermediateUsing Galaxy and Managing your Data workflows -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote
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