Training materials
Authors: Bérénice Batut
and Contributors: Björn Grüning or Lieven Clement or Lounès Chikhi or Matthias Fahrner or Timothy J. Griffin or UC Davis Bioinformatics Core Training Page or Wolfgang Maier
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hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Creating Interactive Galaxy Tours
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Creating content in Markdown
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Tools, Data, and Workflows for tutorials
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Running the GTN website locally
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
slides
Galaxy Interactive Tours
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy
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