Training materials
Authors: Subina Mehta or The Carpentries
and Contributors: Donny Vrins or Dr. Nils Gehlenborg or Ion Moraru or Rob Finn or Saskia Hiltemann or UC Davis Bioinformatics Core Training Page
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hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Python - Flow Control
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Loops
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Basic Types & Type Conversion
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Functions
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to SQL
• beginnerSoftware engineering Foundations of Data Science SQL jupyter-notebook
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