Training materials
Keywords: Text mining or Python or Shell or prokaryote
and Authors: Simon Gladman or allegra.via Via
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hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote -
Introduction to Biopython
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Using R with Python
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Searching data using Python
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Pattern Matching
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