Training materials
Target audience: Biologists, Genomicists, Computer Scientists or Biomedical Researchers or beginner bioinformaticians or project manager
and Authors: Mickeal Leclercq or Vasundra Touré or Will Hsiao
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Infectious Disease Genomic Epidemiology 2018 Module 1-Introduction to Public Health Microbiology and Genomic Epidemiology
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Analysis of Metagenomic Data 2018 Module 2-Marker Gene-Based Analysis
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Analysis of Metagenomic Data 2018 Module 1-Introduction to Metagenomics
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Microbiome Summer School-Big Data Analytics for Omics Science 2017 Module 8-ElasticSearch to Facilitate Data Mining of Human Microbiome Databases
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Infectious Disease Genomic Epidemiology 2017 Module 1-Introduction to Public Health Microbiology and Genomic Epidemiology