Training materials
Keywords: Experimental-design or Institute of Food Research or bioinformatics or transcriptomics
and Authors: Mark Fernandes or Wendi Bacon
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hands-on tutorial
Hands-on for 'Comparing inferred cell compositions using MuSiC deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Generating a single cell matrix using Alevin' tutorial
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hands-on tutorial
Hands-on for 'Bulk RNA Deconvolution with MuSiC' tutorial
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hands-on tutorial
Hands-on for 'Filter, Plot and Explore Single-cell RNA-seq Data' tutorial
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LXDE RStudio with support for bioconductor tools
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IFR Dockerised version of the EBI's Introduction to RNA-seq course
• beginnerRNA-Seq IFR Institute of Food Research Quadram Institute -
Docker version of Welsh Gene Park NGS course
• beginnerNGS IFR Institute of Food Research Quadram Institute -
IFR Dockerised version of the Welsh Genepark's Introduction to Command-line NGS Analysis
• beginnerNGS Command line IFR Institute of Food Research Quadram Institute