Training materials
Keywords: 10x
and Target audience: Students
and Authors: Kathi Zarnack or Mikael Linden or NBIS - National Bioinformatics Infrastructure S... or Saskia Hiltemann or Simon Andrews or Wendi Bacon
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy
• beginnerTranscriptomics 10x Single Cell paper-replication