Training materials
Authors: Joachim Wolff or Kathi Zarnack or The Gulbenkian Training Programme in Bioinforma... or Timothy J. Griffin or Vicky Schneider or Wendi Bacon or rstudio::conf(2022)
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
IGV Introduction
• beginnerIntroduction to Galaxy Analyses -
slides
Introduction to DNA Methylation data analysis
• beginnerEpigenomics Epigenetics -
GTPB/ABSTAT18
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GTPB/PDA19
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GTPB/IBIP19
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GTPB/PSLS20
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GTPB/ELB19F