Training materials
Difficulty level: Beginner
and Authors: Jan Slifka or Kaivan Kamali or Marta Lloret Llinares or NBIS - National Bioinformatics Infrastructure S... or Personalized Health Informatics Group or Stéphanie Robin or Vasundra Touré
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Image classification in Galaxy with fruit 360 dataset
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Deep Learning (Part 2) - Recurrent neural networks (RNN)
• beginnerStatistics and probability Statistics and machine learning -
slides
Recurrent neural networks (RNN) Deep Learning - Part 2
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Deep Learning (Part 3) - Convolutional neural networks (CNN)
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Deep Learning (Part 1) - Feedforward neural networks (FNN)
• beginnerStatistics and probability Statistics and machine learning