Training materials
Authors: Helena Rasche or Yvan Le Bras
and Contributors: Célia Michotey or Marius van den Beek or Nicola Soranzo or Paulette Lieby or Yvan Le Bras
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hands-on tutorial
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
hands-on tutorial
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Champs blocs indicators
• beginnerEcology EBV dataset EBV workflow Ecosystem EBV class Marine ecosystems -
hands-on tutorial
Visualize EBV cube data with Panoply netCDF viewer
• beginnerEcology Data visualization EBV cube interactive-tools -
hands-on tutorial
Cleaning GBIF data for the use in Ecology
• beginnerEcology data cleaning data management gbif -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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hands-on tutorial
Performant Uploads with TUS
• beginnerGalaxy Server administration -
hands-on tutorial
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs