Training materials
Difficulty level: Beginner
and Authors: Helena Rasche or Julia Jakiela or Laura Biggins or Maria Lehtivaara or Mikael Linden
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hands-on tutorial
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
hands-on tutorial
Importing files from public atlases
• beginnerSingle Cell data import data management -
hands-on tutorial
Course Builder
• beginnerTeaching and Hosting Galaxy training cyoa -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Data Manipulation Olympics - SQL
• beginnerSoftware engineering Foundations of Data Science cyoa jupyter-notebook sql -
hands-on tutorial
Data Manipulation Olympics - JQ
• beginnerSoftware engineering Foundations of Data Science cyoa json -
hands-on tutorial
Asynchronous training
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Running a workshop as instructor
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Scanpy Parameter Iterator
• beginnerSingle Cell