Training materials
Authors: Gildas Le Corguillé or Hana Pergl Sustkova or John Chilton or Marek Vrbacky or Matthias Fahrner
and Contributors: Bang Wong or Björn Grüning or Celia van Gelder or Dr. Simon Andrews or Gildas Le Corguillé or Jamie Edwards or Manimozhiyan Arumugam or Marek Vrbacky or Mihaela Martis or Mr. William Edward Hill
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hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry: LC-MS analysis
• beginnerMetabolomics -
slides
Tool Dependencies and Conda
• beginnerSoftware engineering Development in Galaxy -
slides
Galaxy Code Architecture
• beginnerSoftware engineering Development in Galaxy -
slides
Tool Dependencies and Containers
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Introduction to 'Metabolomics'
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course materials, Training materials, Slides
Galaxy Proteomics workshop Prague 2018