Training materials
Status: Active
and Authors: Gary Van Domselaar or Malachi Griffith or Morgan, Steven (orcid: 0000-0001-6038-6126) or Vasundra Touré or Volker Flegel or Yvonne Kallberg
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Data publication
• beginnerData management Open science FAIR data FAIR CONVERGE -
e-learning
High Performance Computing in Life Sciences
•• intermediateComputational biology High performance computing Data storage -
WORKSHOP: RNA-Seq: reads to differential genes and pathways
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WORKSHOP: Single cell RNAseq analysis in R
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Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
WORKSHOP: Hybrid de novo genome assembly
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WORKSHOP: Online data analysis for biologists
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Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology
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