Training materials
Authors: Gary Bader or Maria Lehtivaara or Personalized Health Informatics Group or Saskia Hiltemann
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'Genomic Data Visualisation with JBrowse' tutorial
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hands-on tutorial
Hands-on for 'Visualisation with Circos' tutorial
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hands-on tutorial
Hands-on for 'Set up a Galaxy for Training' tutorial
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hands-on tutorial
Hands-on for 'JavaScript plugins' tutorial