Training materials
Contributors: Helena Rasche
and Keywords: prokaryote or rmarkdown-notebook
and Authors: Fotis E. Psomopoulos or Frédéric de Lamotte or Helena Rasche or Jessica Kirkpatrick krkptrc2@illinois.edu or Valentin Marcon
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hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote