Training materials
Difficulty level: Beginner
and Authors: Erik Hjerde or Erwan Corre or Florian Christoph Sigloch or Kaivan Kamali or Tom Freeman or stortebecker
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Image classification in Galaxy with fruit 360 dataset
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA -
hands-on tutorial
Deep Learning (Part 2) - Recurrent neural networks (RNN)
• beginnerStatistics and probability Statistics and machine learning -
slides
Recurrent neural networks (RNN) Deep Learning - Part 2
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Deep Learning (Part 3) - Convolutional neural networks (CNN)
• beginnerStatistics and probability Statistics and machine learning