Training materials
Scientific topics: Data submission, annotation, and curation or Epigenomics or Protein modifications or Transcriptomics
and Authors: Erasmus Medical Center or Mehmet Tekman or The Griffith Lab or bioinformatics.ca
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bioinformaticsdotca/PNA_2023
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ErasmusMC-Bioinformatics/galaxy-courses
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bioinformaticsdotca/RNA_2023
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bioinformaticsdotca/scRNA_2023
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griffithlab/pmbio.org
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hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell
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