Training materials
Authors: Eija Korpelainen or Erwan Corre or Janick Mathys or Personalized Health Informatics Group or Robin Haw or Samaha, Georgina (orcid: 0000-0003-0419-1476)
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ekorpela/cloud-vm-workshop
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WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
WORKSHOP: Unlocking nf-core - customising workflows for your research
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WEBINAR: Pro tips for scaling bioinformatics workflows to HPC
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
WORKSHOP: Make your bioinformatics workflows findable and citable
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Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics