Training materials
Authors: Donny Vrins or Gary Bader or Krzysztof Poterlowicz or Maria Lehtivaara or Mehmet Tekman or Personalized Health Informatics Group or abretaud or bebatut
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hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
slides
EWAS Epigenome-Wide Association Studies Introduction
• beginnerEpigenomics Epigenetics -
hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
hands-on tutorial
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
hands-on tutorial
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerBioimaging FAIR REMBI -
hands-on tutorial
FAIR Bioimage Metadata
• beginnerFAIR bioimage Bioimage Metadata -
hands-on tutorial
FAIR Galaxy Training Material
• beginnerContributing to the Galaxy Training Material fair gtn training -
hands-on tutorial
FAIR data management solutions
•• intermediateFAIR Data management -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology