Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Dilmurat Yusuf or Gildas Le Corguillé or Helena Rasche
and Contributors: Anthony Bretaudeau or Christine Balmer, UKCEH or Clemens Blank or Mark Beaumont or Simon Gladman
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools -
hands-on tutorial
Reference Data with CVMFS without Ansible
• beginnerGalaxy Server administration -
hands-on tutorial
Reference Data with CVMFS
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
hands-on tutorial
Downloading and Deleting Data in Galaxy
• beginnerUsing Galaxy and Managing your Data