Training materials
Authors: Dieter Maier, Biomax or Simon Gladman
and Contributors: John Sundh or Anna Syme or Anton Nekrutenko or Beatriz Alfaro Serrano, BNN or Vilem Ded or carpentries-incubator
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hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote -
Jaqpot Hackathon - Training materials
••• advancednanoinformatics toxicity prediction e-tools Modeling data FAIRness