Training materials
Target audience: Any students, postdocs or RAs who have an inter... or Computer Vision scientists or Postgraduate students or Professors or Students or Undergraduate students
and Authors: Delphine Lariviere or Marius van den Beek
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hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial
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hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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hands-on tutorial
Group tags for complex experimental designs
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Creating, Editing and Importing Galaxy Workflows
•• intermediateUsing Galaxy and Managing your Data workflows -
hands-on tutorial
Use Jupyter notebooks in Galaxy
• beginnerUsing Galaxy and Managing your Data
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