Training materials
Authors: Delphine Lariviere or Malachi Griffith or Mathieu Bourgey or Nicola Soranzo or Saskia Hiltemann
and Contributors: Simon Gladman or The Carpentries or Youri Hoogstrate
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hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Generic plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
slides
Visualizations: JavaScript Plugins
• beginnerSoftware engineering Development in Galaxy -
slides
Generic plugins
• beginnerSoftware engineering Development in Galaxy -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote -
slides
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration