Training materials
Authors: Delphine Lariviere or Jonathan Kreplak or The Carpentries
and Contributors: Anthony Bretaudeau or Björn Grüning or Donny Vrins or Marcella Sozzoni or Vitor Sousa
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hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Python - Flow Control
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Loops
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Basic Types & Type Conversion
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Functions
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Introduction to SQL
• beginnerSoftware engineering Foundations of Data Science SQL jupyter-notebook -
hands-on tutorial
Python - Lists & Strings & Dictionaries
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly