Training materials
Authors: Delphine Lariviere or Gerard Capes
and Contributors: Delphine Lariviere or Laura Leroi or Michael Parkin or Mikko Rautiainen or Toby Hodges
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hands-on tutorial
Hands-on for 'Essential genes detection with Transposon insertion sequencing' tutorial
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hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Making sense of a newly assembled genome' tutorial
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hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
Hands-on for 'Use Jupyter notebooks in Galaxy' tutorial
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slides
Slides for 'Essential genes detection with Transposon insertion sequencing' tutorial
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slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Slides for 'Unicycler Assembly' tutorial
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Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows