Training materials
Authors: Dayane Araujo or Helena Rasche or Malachi Griffith or Nate Coraor or Paul Yorke
and Contributors: Avans Hogeschool or Simon Gladman
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Reference Data with CVMFS without Ansible
• beginnerGalaxy Server administration -
hands-on tutorial
Reference Data with CVMFS
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Running Jobs on Remote Resources with Pulsar
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook