Training materials
Authors: David Wishart or Florian Christoph Sigloch or Lucille Delisle or Marius van den Beek or Martin Morgan or Matthias Fahrner or Pratik Jagtap or slugger70
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hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
hands-on tutorial
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• beginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
slides
Introduction to metatranscriptomics
• beginnerMetagenomics Microbial ecology Microbiome -
mtmorgan/HCABiocTraining
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Galaxy Introduction for Life Scientists
• beginnerbasic research experimental biology interoperability next generation sequencing reproducibility training michael stadler group -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics