Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Daniel Blankenberg or Egon Willighagen or Janick Mathys or Nicola Soranzo or Sorana Morrissy
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slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Gearing towards production
• beginnerGalaxy Server administration -
slides
Galactic Database
• beginnerGalaxy Server administration -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
Creating InChIKeys for IUPAC names
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerdev jupyter-notebook -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial
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hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell