Training materials
Authors: Cristóbal Gallardo or Egon Willighagen or Jessica Kirkpatrick krkptrc2@illinois.edu or Kaivan Kamali or Kathi Zarnack or Michelle Brazas
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hands-on tutorial
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy nanopore -
hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Creating InChIKeys for IUPAC names
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hands-on tutorial
Principles of learning and how they apply to training and teaching
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio