Training materials
Authors: Christopher Barnett or Instituto Gulbenkian de Ciência or Manuel Corpas or Mikael Linden or Wendi Bacon or bgruening
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hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
slides
Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses -
GTPB/ABSTAT18
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GTPB/PDA19
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GTPB/IBIP19
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GTPB/PSLS20
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GTPB/ELB19F
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GTPB/PSLS22