Training materials
Authors: Christof De Bo or Jessica Kirkpatrick krkptrc2@illinois.edu or Marius van den Beek or Mehmet Tekman or Saskia Hiltemann or shiltemann
and Contributors: Daniel Blankenberg or Praveen Kumar or Wolfgang Maier
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hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
• beginnerGenetic variation Variant Analysis cyoa -
hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
NGS data logistics
• beginnerIntroduction to Galaxy Analyses