Training materials
Difficulty level: Intermediate
and Authors: Celia van Gelder or David Wishart or Delphine Lariviere or Eija Korpelainen @eija, ekorpelainen@gmail.com or Melanie Föll or Michiel Van Bel
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Library Generation for DIA Analysis' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'DIA Analysis using OpenSwathWorkflow' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'Statistical analysis of DIA data' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of label-free data' tutorial
•• intermediateproteomics label-free -
hands-on tutorial
Mass spectrometry imaging: Finding differential analytes
•• intermediateMetabolomics -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation