Training materials
Authors: CRUK CI Bioinformatics Core or Donny Vrins or Gary Bader or Lincoln Stein or Lucille Delisle or Matthias Fahrner or Wendi Bacon or allegra.via Via
-
hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
bioinformatics-core-shared-training/nextflow_september_2021
-
bioinformatics-core-shared-training/Bulk_RNASeq_Course_Nov21
-
bioinformatics-core-shared-training/r-basics
-
bioinformatics-core-shared-training/SingleCell_RNASeq_Jan23
-
bioinformatics-core-shared-training/UnivCambridge_ScRnaSeq_Nov2021
-
bioinformatics-core-shared-training/Bulk_RNASeq_Course_March23
-
bioinformatics-core-shared-training/Quantitative-ChIPseq-Workshop