Training materials
Keywords: Data download or Intro or Phylogenetic tree or Workshop or introduction or virology
and Authors: Bruno Gaeta or Bérénice Batut or David Wishart or Martin Morgan or Obi Griffith or Yo Yehudi or blankclemens
-
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
Lab 1: Introduction to R and Bioconductor
-
Lecture 1: Introduction to R and Bioconductor
-
06: Gene Set Enrichment Analysis
-
05: Bioconductor Annotation Resources
-
06: Gene Set Enrichment -- Introduction
-
04: Practical: Organizing data with SummarizedExperiment
-
03: Core approaches in Bioconductor
-
02: Practical: R / Bioconductor and Reproducible Research
- 1
- 2