Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Boris Steipe or Deshpande, Nandan (orcid: 0000-0002-0324-8728) or James Johnson or Jan Slifka or John Chilton or Laura Leroi or Wendi Bacon
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WEBINAR: Getting started with RNAseq: Transforming raw reads into biological insights
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hands-on tutorial
Hands-on for 'Comparing inferred cell compositions using MuSiC deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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WORKSHOP: RNA-Seq: reads to differential genes and pathways
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WEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
WORKSHOP: Working with genomics sequences and features in R with Bioconductor
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hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote