Training materials
Difficulty level: Intermediate
and Authors: Bishwa Ghimire or Fouad Yousif or Jeremy Cohen or Malachi Griffith or Simon Gladman or Tuur Muyldermans
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podcast, slides
Byte-sized RSE Session 4: Continuous Integration
•• intermediateRSE Research software continuous integration coding skills -
Byte-sized RSE Session 3: Testing your Python code
•• intermediateRSE Research software Python coding skills testing -
podcast, slides
RSE Byte-sized RSE Session 2: Collaboration and Code Review via GitHub
•• intermediateRSE Research software code review -
Byte-sized RSE series
•• intermediateRSE coding skills Research software -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq