Training materials
Authors: Biocore@CRG or David Wishart or Lars Juhl Jensen or Marius van den Beek or Mathieu Bourgey or Stéphanie Robin or The Carpentries or Wendi Bacon
-
hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
biocorecrg/CRG_RIntroduction_2021
-
biocorecrg/CRG_R_tidyverse_2021
-
biocorecrg/SIB_course_nextflow_Nov_2021
-
biocorecrg/ELIXIR_containers_nextflow
-
biocorecrg/RNAseq_course_2019
-
biocorecrg/CoursesCRG_Containers_Nextflow_May_2022