Training materials
Authors: Bernardo Clavijo or Eija Korpelainen or Friederike Ehrhart or Jared Simpson or Julie Sullivan or Lars Juhl Jensen or Lucille Delisle or Maria Victoria . or Subina Mehta or Will Hsiao or abretaud or nekrut
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course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq -
course materials, Video
RNA-seq data analysis
• beginnerRNA-Seq -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Slides
Development in Galaxy - Prerequisites for building software/conda packages
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STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation -
Tutorial
Variant Analysis - Calling very rare variants
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Tutorial
Variant Analysis - Calling variants in diploid systems
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Introduction to Galaxy Analyses - NGS data logistics