Training materials
Keywords: Bioinformatics or Docker or Exploratory-analysis or Gene Expression or metagenomics
and Authors: Beecroft, Sarah (orcid: 0000-0002-3935-2279) or Jorge Buenabad-Chavez or Subina Mehta
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WORKSHOP: Unlocking nf-core - customising workflows for your research
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WEBINAR: Pro tips for scaling bioinformatics workflows to HPC
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course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
WORKSHOP: RNA-Seq: reads to differential genes and pathways
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WEBINAR: Portable, reproducible and scalable bioinformatics workflows using Nextflow and Pawsey Nimbus Cloud
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hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
slides
Slides for 'Introduction to metatranscriptomics' tutorial