Training materials
Authors: Bazante Sanders or Kathi Zarnack or Monique Zahn or Paul Yorke or Simon Gladman or Teaching materials at the Harvard Chan Bioinfor... or Will Hsiao
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
slides
Reference Genomes in Galaxy
• beginnerGalaxy Server administration -
slides
Galaxy Monitoring
• beginnerGalaxy Server administration -
slides
Galaxy on the Cloud
• beginnerGalaxy Server administration -
slides
uWSGI
• beginnerGalaxy Server administration -
e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Interoperable File Formats
• beginnerData management Formatting Interoperability File formats Standards -
hbctraining/BBS230B_2023
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hbctraining/RNA-seq-CB321qc_2022
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hbctraining/Peak_analysis_workshop