Training materials
Scientific topics: Multidrug resistance
and Authors: Bazante Sanders or Dave Clements or David Wishart or Fotis E. Psomopoulos or Frederik Coppens @frcop or Jessica Kirkpatrick krkptrc2@illinois.edu or Maria Levchenko or Pratik Jagtap
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore