Training materials
Authors: Bazante Sanders or Cristóbal Gallardo or Janick Mathys or Krzysztof Poterlowicz or Maria Levchenko or Wandrille Duchemin or stortebecker
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy nanopore -
hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
EWAS Epigenome-Wide Association Studies Introduction
• beginnerEpigenomics Epigenetics -
hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
hands-on tutorial
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
hands-on tutorial
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerBioimaging FAIR REMBI -
hands-on tutorial
FAIR Bioimage Metadata
• beginnerFAIR bioimage Bioimage Metadata