Training materials
Authors: Bazante Sanders or Cristóbal Gallardo or Eija Korpelainen or Jessica Kirkpatrick krkptrc2@illinois.edu or Lincoln Stein or Teaching materials at the Harvard Chan Bioinfor... or nsoranzo or rstudio::conf(2022)
-
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
16S Microbial analysis with Nanopore data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis 16S Microbiome metabarcoding microgalaxy nanopore -
hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
hbctraining/BBS230B_2023
-
hbctraining/RNA-seq-CB321qc_2022
-
hbctraining/Peak_analysis_workshop
-
hbctraining/reproducibility-tools
-
hbctraining/rnaseq-cb321