Training materials
Difficulty level: Intermediate
and Authors: Bartosz Bartmanski or Daniel Blankenberg or Egon Willighagen or Jan Slifka or Martin Čech or Tharindu Senapathi
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
hands-on tutorial
Peptide Library Data Analysis
•• intermediateProteomics -
hands-on tutorial
Hands-on for 'Machine Learning Modeling of Anticancer Peptides' tutorial
•• intermediateproteomics ML cancer -
hands-on tutorial
Analysis of molecular dynamics simulations
•• intermediateComputational chemistry -
hands-on tutorial
Running molecular dynamics simulations using NAMD
•• intermediateComputational chemistry -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Tutorial
Adding nanomaterial data
•• intermediateToxicology Database management ontologies enanomapper RDF -
Entering and analysing nano safety data
•• intermediateontologies enanomapper