Training materials
Difficulty level: Intermediate
and Authors: Baker Matthew or Bazante Sanders or Bilal Shaikh or Christine Staiger or David Wishart or Frédéric de Lamotte
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Best Practices in Programming
•• intermediateprogramming reproducibility bernd rinn group -
hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Globbing' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediatedata-science bash jupyter-notebook -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
course materials
Introduction to Persistent Identifiers
•• intermediateData management system relevant metadata for data PID metadata Python API pyhandle Persistent Identifiers