Training materials
Authors: Bérénice Batut or Marek Vrbacky or Wendi Bacon
and Contributors: Alexandre Cormier or Björn Grüning or Mehmet Tekman or Michael Parkin or Yvonne Kallberg
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Creating Interactive Galaxy Tours
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Creating content in Markdown
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Tools, Data, and Workflows for tutorials
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Running the GTN website locally
• beginnerContributing to the Galaxy Training Material -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell